Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 AC092384.3-202ENST00000564646 2873 ntBASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 AC084364.1-201ENST00000551967 1556 ntBASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 GAPDHP40-201ENST00000505218 1006 ntBASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 USP32P1-208ENST00000506594 1164 ntBASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 BRI3BPP1-201ENST00000594224 787 ntBASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.4■□□□□ 0.54
NKX2-3Q8TAU0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 PDIA3P1-201ENST00000471856 1510 ntBASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 AC144831.1-201ENST00000573312 2656 ntBASIC18.39■□□□□ 0.54
NKX2-3Q8TAU0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 AC093525.8-201ENST00000624099 1342 ntBASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 CICP11-201ENST00000434745 2827 ntBASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 C18orf15-201ENST00000623680 2534 ntBASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.39■□□□□ 0.53
NKX2-3Q8TAU0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 AL359258.3-201ENST00000622910 2331 ntBASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 AC091951.1-201ENST00000512854 2465 ntBASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 FO681548.1-201ENST00000455617 1132 ntBASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 KRT18P43-201ENST00000469825 1281 ntBASIC18.38■□□□□ 0.53
NKX2-3Q8TAU0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms