Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 AC079776.1-201ENST00000401540 1152 ntBASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 AC026410.3-201ENST00000514280 936 ntBASIC16.78■□□□□ 0.28
BEST2Q8NFU1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 ENPP7P5-201ENST00000541031 1031 ntBASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.78■□□□□ 0.28
BEST2Q8NFU1 AC008894.3-201ENST00000624324 3103 ntBASIC16.78■□□□□ 0.28
BEST2Q8NFU1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 DRD5P1-201ENST00000456605 1438 ntBASIC16.78■□□□□ 0.28
BEST2Q8NFU1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST2Q8NFU1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 TTTY23B-201ENST00000442790 549 ntBASIC16.77■□□□□ 0.28
BEST2Q8NFU1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 AC007389.4-201ENST00000454674 793 ntBASIC16.77■□□□□ 0.28
BEST2Q8NFU1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST2Q8NFU1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BEST2Q8NFU1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms