Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 AL928921.2-201ENST00000641325 2442 ntBASIC13.61□□□□□ -0.23
BEST4Q8NFU0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 AC073621.1-201ENST00000392730 636 ntBASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 PMS2P4-201ENST00000412466 1052 ntBASIC13.61□□□□□ -0.23
BEST4Q8NFU0 KRT18P31-201ENST00000506277 1292 ntBASIC13.61□□□□□ -0.23
BEST4Q8NFU0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 MIR3909-201ENST00000579518 119 ntBASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 AL365330.1-201ENST00000607459 531 ntBASIC13.61□□□□□ -0.23
BEST4Q8NFU0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.61□□□□□ -0.23
BEST4Q8NFU0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 KRT8P44-201ENST00000441609 1350 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC093724.1-201ENST00000448659 1027 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 IGHV3-65-201ENST00000523210 341 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 REXO1L6P-202ENST00000619970 1078 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 MIR1199-201ENST00000621445 119 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC093458.2-201ENST00000623150 629 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 CICP17-201ENST00000418553 2377 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 COL6A4P2-202ENST00000504443 2753 ntBASIC13.6□□□□□ -0.23
BEST4Q8NFU0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BEST4Q8NFU0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BEST4Q8NFU0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BEST4Q8NFU0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BEST4Q8NFU0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
BEST4Q8NFU0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BEST4Q8NFU0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
BEST4Q8NFU0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms