Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC087499.5-201ENST00000452760 1342 ntBASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ZNF440Q8IYI8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AC074338.1-201ENST00000416825 156 ntBASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 RPL13P2-201ENST00000440687 659 ntBASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ZNF890P-202ENST00000530367 1156 ntBASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AL512361.1-201ENST00000554200 418 ntBASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AC010336.2-201ENST00000564226 506 ntBASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.32□□□□□ -0.12
ZNF440Q8IYI8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 HYMAI-201ENST00000635591 3347 ntBASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 TOMM22P5-201ENST00000416399 439 ntBASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ZNF440Q8IYI8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms