Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SLC25A6P2-201ENST00000497974 877 ntBASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 AC093827.2-201ENST00000512654 315 ntBASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 AC130686.1-201ENST00000622936 2466 ntBASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.8□□□□□ -0.2
LYSMD2Q8IV50 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 ARMC10P1-201ENST00000313754 855 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC087641.1-201ENST00000557561 1021 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC074051.2-201ENST00000565115 352 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC092329.2-201ENST00000598402 547 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AL589182.2-201ENST00000619332 1049 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AL022326.1-202ENST00000641533 845 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AC005332.1-201ENST00000577698 1310 ntBASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSMD2Q8IV50 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSMD2Q8IV50 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms