Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AL033527.5-202ENST00000641632 1098 ntBASIC13.9□□□□□ -0.18
RTTNQ86VV8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTTNQ86VV8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTTNQ86VV8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTTNQ86VV8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTTNQ86VV8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 MIR943-201ENST00000401286 94 ntBASIC13.9□□□□□ -0.18
RTTNQ86VV8 AC079776.1-201ENST00000401540 1152 ntBASIC13.9□□□□□ -0.18
RTTNQ86VV8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 AC004890.2-204ENST00000481968 304 ntBASIC13.9□□□□□ -0.18
RTTNQ86VV8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTTNQ86VV8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 AC132938.2-201ENST00000579188 680 ntBASIC13.9□□□□□ -0.18
RTTNQ86VV8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 AL591163.1-201ENST00000641757 987 ntBASIC13.9□□□□□ -0.18
RTTNQ86VV8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RTTNQ86VV8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RTTNQ86VV8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RTTNQ86VV8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RTTNQ86VV8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 TARDBPP1-201ENST00000442013 1203 ntBASIC13.89□□□□□ -0.19
RTTNQ86VV8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 MIR4538-201ENST00000581377 78 ntBASIC13.89□□□□□ -0.19
RTTNQ86VV8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RTTNQ86VV8 AC023824.1-201ENST00000562945 2975 ntBASIC13.89□□□□□ -0.19
RTTNQ86VV8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RTTNQ86VV8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 AC100757.3-201ENST00000622361 1406 ntBASIC13.88□□□□□ -0.19
RTTNQ86VV8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 AC015656.1-201ENST00000624209 3578 ntBASIC13.88□□□□□ -0.19
RTTNQ86VV8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 CYP4F24P-201ENST00000586049 1580 ntBASIC13.88□□□□□ -0.19
RTTNQ86VV8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 KRT8P37-201ENST00000451609 1420 ntBASIC13.88□□□□□ -0.19
RTTNQ86VV8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms