Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 AC190387.1-201ENST00000551683 408 ntBASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 AC009118.2-201ENST00000613275 655 ntBASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 AC105250.1-201ENST00000509378 2057 ntBASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LYSMD3Q7Z3D4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 GNAQP1-201ENST00000444815 1067 ntBASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LYSMD3Q7Z3D4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.73■□□□□ 0.11
LYSMD3Q7Z3D4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms