Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 AC139749.1-202ENST00000617529 3139 ntBASIC10.47□□□□□ -0.73
SCXQ7RTU7 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 AC092580.3-201ENST00000430932 139 ntBASIC10.47□□□□□ -0.73
SCXQ7RTU7 AC241585.1-201ENST00000433527 519 ntBASIC10.47□□□□□ -0.73
SCXQ7RTU7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 AC073389.1-201ENST00000595595 795 ntBASIC10.47□□□□□ -0.73
SCXQ7RTU7 AC073592.8-201ENST00000624126 511 ntBASIC10.47□□□□□ -0.73
SCXQ7RTU7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 AP3S2-216ENST00000617003 1561 ntBASIC10.47□□□□□ -0.73
SCXQ7RTU7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SCXQ7RTU7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
SCXQ7RTU7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC073347.1-201ENST00000421633 2643 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 TNRC18P2-201ENST00000417666 2714 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 HLA-H-201ENST00000383620 1096 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 MIR661-201ENST00000384842 89 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 FAM207CP-201ENST00000443486 507 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC027369.6-201ENST00000525520 931 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC10.46□□□□□ -0.73
SCXQ7RTU7 LINC02560-201ENST00000596379 459 ntBASIC10.46□□□□□ -0.73
SCXQ7RTU7 SPDYE12P-201ENST00000618416 771 ntBASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms