Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AL139010.1-201ENST00000454878 894 ntBASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AL096865.1-201ENST00000606796 927 ntBASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC104581.4-201ENST00000623126 3052 ntBASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP1BQ7LBR1 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 FAM8A3P-201ENST00000427218 844 ntBASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 HLA-V-204ENST00000476601 1289 ntBASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP1BQ7LBR1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.54□□□□□ -0.08
CHMP1BQ7LBR1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms