Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 MIR1233-2-201ENST00000408138 82 ntBASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 MIR1233-1-201ENST00000408722 82 ntBASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 HLA-V-204ENST00000476601 1289 ntBASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 AL033527.5-202ENST00000641632 1098 ntBASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 SBF1P1-201ENST00000444527 5631 ntBASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST2H3AQ71DI3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 Z97205.2-201ENST00000564697 1639 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AC074338.1-201ENST00000416825 156 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 SERBP1P3-201ENST00000459980 809 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AP001160.2-201ENST00000596071 487 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AL691403.2-201ENST00000618460 490 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 Z92544.3-201ENST00000624747 417 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AP002414.2-201ENST00000591780 3365 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AC023157.3-201ENST00000619086 2088 ntBASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST2H3AQ71DI3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HIST2H3AQ71DI3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms