Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.56■□□□□ 0.56
CTR9Q6PD62 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTR9Q6PD62 AC127383.1-201ENST00000444697 1800 ntBASIC18.56■□□□□ 0.56
CTR9Q6PD62 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 TMEM14DP-201ENST00000422205 345 ntBASIC18.55■□□□□ 0.56
CTR9Q6PD62 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.55■□□□□ 0.56
CTR9Q6PD62 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 DRD5P1-201ENST00000456605 1438 ntBASIC18.55■□□□□ 0.56
CTR9Q6PD62 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTR9Q6PD62 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTR9Q6PD62 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AC120045.2-201ENST00000567334 178 ntBASIC18.54■□□□□ 0.56
CTR9Q6PD62 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 AC009090.5-201ENST00000624886 2285 ntBASIC18.54■□□□□ 0.56
CTR9Q6PD62 KRT8P22-201ENST00000562317 1415 ntBASIC18.54■□□□□ 0.56
CTR9Q6PD62 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.54■□□□□ 0.56
CTR9Q6PD62 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTR9Q6PD62 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTR9Q6PD62 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTR9Q6PD62 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms