Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 KLF2P4-201ENST00000451959 1225 ntBASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 CTBP2P5-201ENST00000454986 1264 ntBASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 MIR4259-201ENST00000584466 101 ntBASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC27A1Q6PCB7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 KRT18P25-201ENST00000508931 1278 ntBASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC27A1Q6PCB7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 RPL5P21-201ENST00000404620 815 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AC016694.1-201ENST00000434179 700 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 RPS2P32-201ENST00000439199 892 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AC007551.1-201ENST00000457394 519 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 FTH1P14-201ENST00000482930 551 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms