Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC010336.2-201ENST00000564226 506 ntBASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC074044.1-201ENST00000609673 707 ntBASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC006058.4-201ENST00000624016 1670 ntBASIC18.72■□□□□ 0.59
RNF20Q5VTR2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF20Q5VTR2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 KRT8P44-201ENST00000441609 1350 ntBASIC18.71■□□□□ 0.59
RNF20Q5VTR2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 SDHAP3-202ENST00000515467 728 ntBASIC18.71■□□□□ 0.59
RNF20Q5VTR2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 AC087499.5-201ENST00000452760 1342 ntBASIC18.71■□□□□ 0.59
RNF20Q5VTR2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF20Q5VTR2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF20Q5VTR2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
RNF20Q5VTR2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 METTL21AP1-201ENST00000438852 635 ntBASIC18.7■□□□□ 0.58
RNF20Q5VTR2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF20Q5VTR2 AC084364.1-201ENST00000551967 1556 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms