Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.34□□□□□ -0.11
LTBQ06643 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.34□□□□□ -0.11
LTBQ06643 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.34□□□□□ -0.11
LTBQ06643 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LTBQ06643 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.34□□□□□ -0.11
LTBQ06643 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LTBQ06643 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
LTBQ06643 NME2P1-201ENST00000426182 414 ntBASIC14.34□□□□□ -0.11
LTBQ06643 AL353705.2-201ENST00000428243 662 ntBASIC14.34□□□□□ -0.11
LTBQ06643 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.34□□□□□ -0.11
LTBQ06643 KLF2P3-201ENST00000451977 1087 ntBASIC14.34□□□□□ -0.11
LTBQ06643 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.34□□□□□ -0.11
LTBQ06643 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.34□□□□□ -0.11
LTBQ06643 IGHV3-42-201ENST00000520410 361 ntBASIC14.34□□□□□ -0.11
LTBQ06643 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.34□□□□□ -0.11
LTBQ06643 MIR4453-201ENST00000584019 89 ntBASIC14.34□□□□□ -0.11
LTBQ06643 AL606495.2-201ENST00000605867 535 ntBASIC14.34□□□□□ -0.11
LTBQ06643 RN7SL828P-201ENST00000607615 303 ntBASIC14.34□□□□□ -0.11
LTBQ06643 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 TMBIM7P-203ENST00000641617 1718 ntBASIC14.34□□□□□ -0.11
LTBQ06643 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LTBQ06643 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.34□□□□□ -0.11
LTBQ06643 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
LTBQ06643 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTBQ06643 AC099063.4-201ENST00000641099 1602 ntBASIC14.33□□□□□ -0.11
LTBQ06643 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.33□□□□□ -0.11
LTBQ06643 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.33□□□□□ -0.11
LTBQ06643 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LTBQ06643 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
LTBQ06643 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LTBQ06643 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 SPDYE17-201ENST00000412399 783 ntBASIC14.33□□□□□ -0.12
LTBQ06643 AC107890.1-201ENST00000422478 521 ntBASIC14.33□□□□□ -0.12
LTBQ06643 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 HIST3H2BA-201ENST00000436555 524 ntBASIC14.33□□□□□ -0.12
LTBQ06643 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.33□□□□□ -0.12
LTBQ06643 HNRNPUP1-201ENST00000554987 333 ntBASIC14.33□□□□□ -0.12
LTBQ06643 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.33□□□□□ -0.12
LTBQ06643 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.33□□□□□ -0.12
LTBQ06643 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 AL136379.1-201ENST00000623471 2642 ntBASIC14.33□□□□□ -0.12
LTBQ06643 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms