Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZC3H6P61129 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H6P61129 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H6P61129 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H6P61129 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H6P61129 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3H6P61129 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H6P61129 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3H6P61129 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H6P61129 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 IGF1-203ENST00000392904 761 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3H6P61129 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 AL354877.1-201ENST00000424412 413 ntBASIC20.62■□□□□ 0.89
ZC3H6P61129 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 SUPT4H1P2-201ENST00000501248 353 ntBASIC20.62■□□□□ 0.89
ZC3H6P61129 AC024681.1-201ENST00000521917 487 ntBASIC20.62■□□□□ 0.89
ZC3H6P61129 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H6P61129 INO80C-210ENST00000590757 595 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H6P61129 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3H6P61129 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3H6P61129 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3H6P61129 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3H6P61129 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZC3H6P61129 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3H6P61129 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3H6P61129 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ZC3H6P61129 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H6P61129 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H6P61129 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 DPM3-202ENST00000368399 517 ntBASIC20.61■□□□□ 0.89
ZC3H6P61129 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ZC3H6P61129 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H6P61129 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H6P61129 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 RNMTL1P1-201ENST00000454103 560 ntBASIC20.61■□□□□ 0.89
ZC3H6P61129 AC012618.1-201ENST00000461223 412 ntBASIC20.61■□□□□ 0.89
ZC3H6P61129 AC021723.1-201ENST00000486306 515 ntBASIC20.61■□□□□ 0.89
ZC3H6P61129 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H6P61129 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H6P61129 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3H6P61129 AF254983.2-201ENST00000612331 135 ntBASIC20.61■□□□□ 0.89
ZC3H6P61129 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3H6P61129 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ZC3H6P61129 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H6P61129 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3H6P61129 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H6P61129 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H6P61129 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H6P61129 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.6■□□□□ 0.89
ZC3H6P61129 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H6P61129 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H6P61129 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.6■□□□□ 0.89
ZC3H6P61129 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC20.6■□□□□ 0.89
ZC3H6P61129 MAGEA5-201ENST00000446757 942 ntBASIC20.6■□□□□ 0.89
ZC3H6P61129 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 AC004066.1-201ENST00000502488 802 ntBASIC20.6■□□□□ 0.89
ZC3H6P61129 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H6P61129 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms