Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC42P60953 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC42P60953 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC42P60953 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC42P60953 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42P60953 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.38□□□□□ -0.11
CDC42P60953 PRELID1P1-202ENST00000567272 903 ntBASIC14.38□□□□□ -0.11
CDC42P60953 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC42P60953 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC42P60953 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42P60953 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CDC42P60953 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42P60953 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDC42P60953 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 WASH3P-207ENST00000560956 1394 ntBASIC14.37□□□□□ -0.11
CDC42P60953 FO538757.1-201ENST00000623083 1397 ntBASIC14.37□□□□□ -0.11
CDC42P60953 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDC42P60953 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
CDC42P60953 AC004987.2-201ENST00000395959 1148 ntBASIC14.37□□□□□ -0.11
CDC42P60953 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC42P60953 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.37□□□□□ -0.11
CDC42P60953 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.37□□□□□ -0.11
CDC42P60953 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC42P60953 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42P60953 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42P60953 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDC42P60953 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC42P60953 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.36□□□□□ -0.11
CDC42P60953 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC42P60953 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC42P60953 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC42P60953 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDC42P60953 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDC42P60953 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDC42P60953 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42P60953 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms