Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AJ011931.1-201ENST00000618749 2492 ntBASIC12.27□□□□□ -0.45
ERVFC1-1P60608 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
ERVFC1-1P60608 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.27□□□□□ -0.45
ERVFC1-1P60608 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 AC005562.1-201ENST00000583030 3219 ntBASIC12.26□□□□□ -0.45
ERVFC1-1P60608 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SPDYE21P-201ENST00000413323 827 ntBASIC12.26□□□□□ -0.45
ERVFC1-1P60608 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 CHCHD2P8-201ENST00000429873 447 ntBASIC12.26□□□□□ -0.45
ERVFC1-1P60608 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 AP001350.2-201ENST00000625104 1094 ntBASIC12.26□□□□□ -0.45
ERVFC1-1P60608 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 INTS4P1-203ENST00000641008 3683 ntBASIC12.26□□□□□ -0.45
ERVFC1-1P60608 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.26□□□□□ -0.45
ERVFC1-1P60608 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AL845331.1-201ENST00000424978 1190 ntBASIC12.25□□□□□ -0.45
ERVFC1-1P60608 TSPY22P-201ENST00000427496 604 ntBASIC12.25□□□□□ -0.45
ERVFC1-1P60608 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 VENTXP7-201ENST00000475503 772 ntBASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ERVFC1-1P60608 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms