Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.66□□□□□ -0.54
CMC4P56277 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CMC4P56277 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 SLC7A15P-201ENST00000424028 1363 ntBASIC11.66□□□□□ -0.54
CMC4P56277 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.66□□□□□ -0.54
CMC4P56277 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CMC4P56277 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 SERBP1P5-201ENST00000510079 1181 ntBASIC11.65□□□□□ -0.54
CMC4P56277 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.65□□□□□ -0.54
CMC4P56277 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.65□□□□□ -0.54
CMC4P56277 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.65□□□□□ -0.54
CMC4P56277 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.65□□□□□ -0.54
CMC4P56277 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.65□□□□□ -0.54
CMC4P56277 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.65□□□□□ -0.54
CMC4P56277 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.65□□□□□ -0.54
CMC4P56277 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
CMC4P56277 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CMC4P56277 MIR193BHG-211ENST00000641433 5365 ntBASIC11.65□□□□□ -0.54
CMC4P56277 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CMC4P56277 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.65□□□□□ -0.55
CMC4P56277 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CMC4P56277 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.65□□□□□ -0.55
CMC4P56277 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CMC4P56277 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.65□□□□□ -0.55
CMC4P56277 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.55
CMC4P56277 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
CMC4P56277 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
CMC4P56277 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 AC099398.1-201ENST00000567919 2776 ntBASIC11.64□□□□□ -0.55
CMC4P56277 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.64□□□□□ -0.55
CMC4P56277 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.64□□□□□ -0.55
CMC4P56277 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
CMC4P56277 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CMC4P56277 AC236430.1-201ENST00000402231 743 ntBASIC11.64□□□□□ -0.55
CMC4P56277 AC074338.1-201ENST00000416825 156 ntBASIC11.64□□□□□ -0.55
CMC4P56277 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.64□□□□□ -0.55
CMC4P56277 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.64□□□□□ -0.55
CMC4P56277 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.64□□□□□ -0.55
CMC4P56277 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CMC4P56277 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CMC4P56277 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.64□□□□□ -0.55
CMC4P56277 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.64□□□□□ -0.55
CMC4P56277 TMEM261P1-201ENST00000604899 340 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms