Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CDH13P55290 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.36■□□□□ 0.05
CDH13P55290 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CDH13P55290 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.36■□□□□ 0.05
CDH13P55290 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 AC093520.2-201ENST00000561830 333 ntBASIC15.36■□□□□ 0.05
CDH13P55290 AC005829.1-201ENST00000570002 483 ntBASIC15.36■□□□□ 0.05
CDH13P55290 AC105021.1-202ENST00000570572 669 ntBASIC15.36■□□□□ 0.05
CDH13P55290 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 CICP23-201ENST00000605013 2741 ntBASIC15.36■□□□□ 0.05
CDH13P55290 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH13P55290 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDH13P55290 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDH13P55290 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH13P55290 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH13P55290 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH13P55290 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH13P55290 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDH13P55290 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH13P55290 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 AC004461.1-201ENST00000412461 403 ntBASIC15.35■□□□□ 0.05
CDH13P55290 AC136604.1-201ENST00000418535 575 ntBASIC15.35■□□□□ 0.05
CDH13P55290 KRT18P32-201ENST00000424695 1287 ntBASIC15.35■□□□□ 0.05
CDH13P55290 AL353705.2-201ENST00000428243 662 ntBASIC15.35■□□□□ 0.05
CDH13P55290 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH13P55290 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.35■□□□□ 0.05
CDH13P55290 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 AC018529.1-201ENST00000613063 361 ntBASIC15.35■□□□□ 0.05
CDH13P55290 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH13P55290 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH13P55290 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
CDH13P55290 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDH13P55290 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDH13P55290 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH13P55290 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDH13P55290 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH13P55290 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH13P55290 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms