Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
APOC4P55056 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.47□□□□□ -0.57
APOC4P55056 C1QBPP1-201ENST00000400117 770 ntBASIC11.47□□□□□ -0.57
APOC4P55056 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
APOC4P55056 KRT18P64-201ENST00000434946 1219 ntBASIC11.47□□□□□ -0.57
APOC4P55056 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.47□□□□□ -0.57
APOC4P55056 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 RN7SL837P-201ENST00000463010 287 ntBASIC11.47□□□□□ -0.57
APOC4P55056 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.47□□□□□ -0.57
APOC4P55056 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.47□□□□□ -0.57
APOC4P55056 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 BRI3BPP1-201ENST00000594224 787 ntBASIC11.47□□□□□ -0.57
APOC4P55056 AC000095.1-201ENST00000603208 874 ntBASIC11.47□□□□□ -0.57
APOC4P55056 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.47□□□□□ -0.57
APOC4P55056 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC11.47□□□□□ -0.57
APOC4P55056 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
APOC4P55056 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC4P55056 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.46□□□□□ -0.57
APOC4P55056 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
APOC4P55056 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 AC098850.1-201ENST00000419919 790 ntBASIC11.46□□□□□ -0.57
APOC4P55056 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 AC234783.1-201ENST00000441761 496 ntBASIC11.46□□□□□ -0.57
APOC4P55056 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.46□□□□□ -0.57
APOC4P55056 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
APOC4P55056 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 AC009486.1-201ENST00000569860 813 ntBASIC11.46□□□□□ -0.57
APOC4P55056 AC015910.1-201ENST00000579400 975 ntBASIC11.46□□□□□ -0.57
APOC4P55056 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.46□□□□□ -0.57
APOC4P55056 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC4P55056 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
APOC4P55056 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
APOC4P55056 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC4P55056 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC4P55056 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.46□□□□□ -0.58
APOC4P55056 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC4P55056 AC018892.3-201ENST00000623986 2499 ntBASIC11.46□□□□□ -0.58
APOC4P55056 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC4P55056 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC4P55056 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC4P55056 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.46□□□□□ -0.58
APOC4P55056 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.46□□□□□ -0.58
APOC4P55056 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
APOC4P55056 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.46□□□□□ -0.58
APOC4P55056 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.46□□□□□ -0.58
APOC4P55056 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
APOC4P55056 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
APOC4P55056 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
APOC4P55056 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
APOC4P55056 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms