Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.67□□□□□ -0.22
ATP1B3P54709 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.67□□□□□ -0.22
ATP1B3P54709 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ATP1B3P54709 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ATP1B3P54709 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 MIR346-201ENST00000362234 95 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 YBX2P1-201ENST00000394192 760 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 AC026396.1-201ENST00000419388 421 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 SPCS2P4-201ENST00000436160 681 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.66□□□□□ -0.22
ATP1B3P54709 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.66□□□□□ -0.22
ATP1B3P54709 AC079140.1-201ENST00000508039 487 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 KRT18P58-201ENST00000527480 1120 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ATP1B3P54709 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.66□□□□□ -0.22
ATP1B3P54709 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 AC105250.1-201ENST00000509378 2057 ntBASIC13.66□□□□□ -0.22
ATP1B3P54709 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATP1B3P54709 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.66□□□□□ -0.22
ATP1B3P54709 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ATP1B3P54709 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 UXT-AS1-201ENST00000590504 1525 ntBASIC13.65□□□□□ -0.22
ATP1B3P54709 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ATP1B3P54709 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.65□□□□□ -0.22
ATP1B3P54709 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.65□□□□□ -0.22
ATP1B3P54709 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.65□□□□□ -0.22
ATP1B3P54709 TIMM8BP1-201ENST00000452384 211 ntBASIC13.65□□□□□ -0.22
ATP1B3P54709 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.65□□□□□ -0.22
ATP1B3P54709 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 MTDHP5-201ENST00000598980 586 ntBASIC13.65□□□□□ -0.22
ATP1B3P54709 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 C20orf181-201ENST00000623918 480 ntBASIC13.65□□□□□ -0.22
ATP1B3P54709 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ATP1B3P54709 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 AC092127.1-201ENST00000567093 3455 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms