Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PDX1P52945 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.21■□□□□ 0.02
PDX1P52945 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.2■□□□□ 0.02
PDX1P52945 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDX1P52945 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PDX1P52945 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 AC099336.1-201ENST00000417053 1171 ntBASIC15.2■□□□□ 0.02
PDX1P52945 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.2■□□□□ 0.02
PDX1P52945 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.2■□□□□ 0.02
PDX1P52945 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 TDH-203ENST00000531764 1110 ntBASIC15.2■□□□□ 0.02
PDX1P52945 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 AL583810.1-201ENST00000553344 1045 ntBASIC15.2■□□□□ 0.02
PDX1P52945 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.2■□□□□ 0.02
PDX1P52945 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 MIR4538-201ENST00000581377 78 ntBASIC15.2■□□□□ 0.02
PDX1P52945 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.2■□□□□ 0.02
PDX1P52945 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.2■□□□□ 0.02
PDX1P52945 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 AC046158.3-201ENST00000624947 2558 ntBASIC15.2■□□□□ 0.02
PDX1P52945 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PDX1P52945 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PDX1P52945 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDX1P52945 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
PDX1P52945 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.19■□□□□ 0.02
PDX1P52945 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.19■□□□□ 0.02
PDX1P52945 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDX1P52945 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDX1P52945 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PDX1P52945 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.19■□□□□ 0.02
PDX1P52945 MIR1908-201ENST00000410394 80 ntBASIC15.19■□□□□ 0.02
PDX1P52945 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.19■□□□□ 0.02
PDX1P52945 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.19■□□□□ 0.02
PDX1P52945 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms