Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.26■□□□□ 0.35
CENPFP49454 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPFP49454 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 AL023803.2-201ENST00000620080 638 ntBASIC17.26■□□□□ 0.35
CENPFP49454 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.26■□□□□ 0.35
CENPFP49454 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPFP49454 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CENPFP49454 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 AP001282.1-201ENST00000531301 1499 ntBASIC17.26■□□□□ 0.35
CENPFP49454 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 POM121L8P-201ENST00000417732 1281 ntBASIC17.26■□□□□ 0.35
CENPFP49454 POM121L9P-203ENST00000441984 1285 ntBASIC17.26■□□□□ 0.35
CENPFP49454 NSD1-211ENST00000511258 809 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPFP49454 AC005324.6-201ENST00000587972 613 ntBASIC17.26■□□□□ 0.35
CENPFP49454 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPFP49454 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPFP49454 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPFP49454 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 TBC1D3J-201ENST00000620719 1426 ntBASIC17.25■□□□□ 0.35
CENPFP49454 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 AC073150.1-201ENST00000450406 1084 ntBASIC17.25■□□□□ 0.35
CENPFP49454 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 AP003392.6-201ENST00000607709 325 ntBASIC17.25■□□□□ 0.35
CENPFP49454 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 AC074138.1-201ENST00000611182 1303 ntBASIC17.25■□□□□ 0.35
CENPFP49454 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPFP49454 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 RPS9P1-201ENST00000419943 583 ntBASIC17.25■□□□□ 0.35
CENPFP49454 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPFP49454 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPFP49454 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CENPFP49454 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPFP49454 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
CENPFP49454 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CENPFP49454 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CENPFP49454 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.24■□□□□ 0.35
CENPFP49454 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.24■□□□□ 0.35
CENPFP49454 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CENPFP49454 AC015909.3-201ENST00000572855 1794 ntBASIC17.24■□□□□ 0.35
CENPFP49454 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 REXO1L2P-201ENST00000425429 2069 ntBASIC17.24■□□□□ 0.35
CENPFP49454 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CENPFP49454 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CENPFP49454 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 CHMP1AP1-201ENST00000445563 662 ntBASIC17.24■□□□□ 0.35
CENPFP49454 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.24■□□□□ 0.35
CENPFP49454 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.24■□□□□ 0.35
CENPFP49454 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CENPFP49454 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms