Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLCN1P35523 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC17.89■□□□□ 0.45
CLCN1P35523 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCN1P35523 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLCN1P35523 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CLCN1P35523 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCN1P35523 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.88■□□□□ 0.45
CLCN1P35523 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 RNA5SP415-201ENST00000517246 115 ntBASIC17.88■□□□□ 0.45
CLCN1P35523 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.88■□□□□ 0.45
CLCN1P35523 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.88■□□□□ 0.45
CLCN1P35523 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.88■□□□□ 0.45
CLCN1P35523 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLCN1P35523 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLCN1P35523 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 HCG4-201ENST00000418983 998 ntBASIC17.87■□□□□ 0.45
CLCN1P35523 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.87■□□□□ 0.45
CLCN1P35523 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCN1P35523 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.87■□□□□ 0.45
CLCN1P35523 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLCN1P35523 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.87■□□□□ 0.45
CLCN1P35523 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLCN1P35523 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.87■□□□□ 0.45
CLCN1P35523 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.87■□□□□ 0.45
CLCN1P35523 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 AC097359.2-201ENST00000604992 2389 ntBASIC17.86■□□□□ 0.45
CLCN1P35523 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLCN1P35523 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLCN1P35523 IGLL3P-201ENST00000412472 434 ntBASIC17.86■□□□□ 0.45
CLCN1P35523 AC093909.1-201ENST00000504731 1122 ntBASIC17.86■□□□□ 0.45
CLCN1P35523 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCN1P35523 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.86■□□□□ 0.45
CLCN1P35523 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLCN1P35523 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms