Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.24□□□□□ -0.13
APEX1P27695 AL645939.2-201ENST00000427340 991 ntBASIC14.24□□□□□ -0.13
APEX1P27695 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.24□□□□□ -0.13
APEX1P27695 AL592309.1-201ENST00000443127 649 ntBASIC14.24□□□□□ -0.13
APEX1P27695 CYMP-203ENST00000474680 1263 ntBASIC14.24□□□□□ -0.13
APEX1P27695 AP000344.2-201ENST00000512987 629 ntBASIC14.24□□□□□ -0.13
APEX1P27695 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.24□□□□□ -0.13
APEX1P27695 AC105233.2-201ENST00000523697 349 ntBASIC14.24□□□□□ -0.13
APEX1P27695 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.24□□□□□ -0.13
APEX1P27695 AF228730.5-201ENST00000530288 346 ntBASIC14.24□□□□□ -0.13
APEX1P27695 RFPL4AP1-201ENST00000530883 850 ntBASIC14.24□□□□□ -0.13
APEX1P27695 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.24□□□□□ -0.13
APEX1P27695 AC022145.2-201ENST00000598203 171 ntBASIC14.24□□□□□ -0.13
APEX1P27695 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.24□□□□□ -0.13
APEX1P27695 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.24□□□□□ -0.13
APEX1P27695 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.24□□□□□ -0.13
APEX1P27695 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.24□□□□□ -0.13
APEX1P27695 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 UXT-AS1-201ENST00000590504 1525 ntBASIC14.24□□□□□ -0.13
APEX1P27695 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APEX1P27695 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 AC005912.2-201ENST00000619492 2400 ntBASIC14.24□□□□□ -0.13
APEX1P27695 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.24□□□□□ -0.13
APEX1P27695 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.24□□□□□ -0.13
APEX1P27695 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APEX1P27695 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APEX1P27695 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APEX1P27695 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.23□□□□□ -0.13
APEX1P27695 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.23□□□□□ -0.13
APEX1P27695 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.23□□□□□ -0.13
APEX1P27695 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.23□□□□□ -0.13
APEX1P27695 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.23□□□□□ -0.13
APEX1P27695 AC004835.2-201ENST00000603762 682 ntBASIC14.23□□□□□ -0.13
APEX1P27695 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.23□□□□□ -0.13
APEX1P27695 AC106028.4-201ENST00000614509 607 ntBASIC14.23□□□□□ -0.13
APEX1P27695 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
APEX1P27695 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.23□□□□□ -0.13
APEX1P27695 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APEX1P27695 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.23□□□□□ -0.13
APEX1P27695 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.22□□□□□ -0.13
APEX1P27695 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APEX1P27695 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APEX1P27695 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APEX1P27695 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
APEX1P27695 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.22□□□□□ -0.13
APEX1P27695 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APEX1P27695 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APEX1P27695 AL589702.1-201ENST00000641229 1509 ntBASIC14.22□□□□□ -0.13
APEX1P27695 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APEX1P27695 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms