Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.1□□□□□ -0.47
RAB4AP20338 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
RAB4AP20338 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.1□□□□□ -0.47
RAB4AP20338 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
RAB4AP20338 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB4AP20338 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 MIR648-201ENST00000385046 94 ntBASIC12.09□□□□□ -0.47
RAB4AP20338 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 AC009533.2-201ENST00000543664 586 ntBASIC12.09□□□□□ -0.47
RAB4AP20338 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 AC011840.4-201ENST00000578471 627 ntBASIC12.09□□□□□ -0.47
RAB4AP20338 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
RAB4AP20338 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
RAB4AP20338 AC124864.1-201ENST00000623408 392 ntBASIC12.09□□□□□ -0.47
RAB4AP20338 AC011558.1-201ENST00000623459 338 ntBASIC12.09□□□□□ -0.47
RAB4AP20338 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RAB4AP20338 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
RAB4AP20338 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RAB4AP20338 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB4AP20338 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 TRIM80P-201ENST00000455685 2848 ntBASIC12.09□□□□□ -0.47
RAB4AP20338 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB4AP20338 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms