Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCL3P19876 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CXCL3P19876 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CXCL3P19876 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CXCL3P19876 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CXCL3P19876 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CXCL3P19876 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.19□□□□□ -0.3
CXCL3P19876 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CXCL3P19876 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CXCL3P19876 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 TSPY22P-201ENST00000427496 604 ntBASIC13.18□□□□□ -0.3
CXCL3P19876 SLC25A6P2-201ENST00000497974 877 ntBASIC13.18□□□□□ -0.3
CXCL3P19876 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CXCL3P19876 AC022616.7-201ENST00000525383 220 ntBASIC13.18□□□□□ -0.3
CXCL3P19876 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 IGHV3-41-201ENST00000613121 348 ntBASIC13.18□□□□□ -0.3
CXCL3P19876 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.18□□□□□ -0.3
CXCL3P19876 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CXCL3P19876 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CXCL3P19876 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.18□□□□□ -0.3
CXCL3P19876 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CXCL3P19876 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 AC015802.1-201ENST00000588104 1449 ntBASIC13.17□□□□□ -0.3
CXCL3P19876 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms