Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.45■□□□□ 0.22
PDGFRAP16234 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PDGFRAP16234 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.45■□□□□ 0.22
PDGFRAP16234 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFRAP16234 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 LINC00554-201ENST00000564841 3011 ntBASIC16.45■□□□□ 0.22
PDGFRAP16234 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 AC063926.3-201ENST00000624734 5658 ntBASIC16.45■□□□□ 0.22
PDGFRAP16234 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.45■□□□□ 0.22
PDGFRAP16234 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PDGFRAP16234 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDGFRAP16234 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PDGFRAP16234 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFRAP16234 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFRAP16234 AC002472.2-201ENST00000442739 958 ntBASIC16.44■□□□□ 0.22
PDGFRAP16234 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFRAP16234 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.44■□□□□ 0.22
PDGFRAP16234 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 AC008738.7-201ENST00000609744 511 ntBASIC16.44■□□□□ 0.22
PDGFRAP16234 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.44■□□□□ 0.22
PDGFRAP16234 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFRAP16234 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PDGFRAP16234 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.44■□□□□ 0.22
PDGFRAP16234 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.44■□□□□ 0.22
PDGFRAP16234 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDGFRAP16234 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.44■□□□□ 0.22
PDGFRAP16234 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
PDGFRAP16234 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 AC015922.1-201ENST00000421102 1152 ntBASIC16.43■□□□□ 0.22
PDGFRAP16234 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.43■□□□□ 0.22
PDGFRAP16234 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 LINC02560-201ENST00000596379 459 ntBASIC16.43■□□□□ 0.22
PDGFRAP16234 AC112693.3-201ENST00000624819 1983 ntBASIC16.43■□□□□ 0.22
PDGFRAP16234 AC144831.1-201ENST00000573312 2656 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms