Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.44□□□□□ -0.1
THBS1P07996 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.44□□□□□ -0.1
THBS1P07996 AL096865.1-201ENST00000606796 927 ntBASIC14.44□□□□□ -0.1
THBS1P07996 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.44□□□□□ -0.1
THBS1P07996 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.44□□□□□ -0.1
THBS1P07996 AC106028.4-201ENST00000614509 607 ntBASIC14.44□□□□□ -0.1
THBS1P07996 LINC00628-201ENST00000628516 1289 ntBASIC14.44□□□□□ -0.1
THBS1P07996 AL033527.5-202ENST00000641632 1098 ntBASIC14.44□□□□□ -0.1
THBS1P07996 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
THBS1P07996 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
THBS1P07996 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.44□□□□□ -0.1
THBS1P07996 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
THBS1P07996 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
THBS1P07996 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.44□□□□□ -0.1
THBS1P07996 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
THBS1P07996 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.44□□□□□ -0.1
THBS1P07996 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
THBS1P07996 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
THBS1P07996 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
THBS1P07996 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
THBS1P07996 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
THBS1P07996 AC067930.6-201ENST00000623257 4947 ntBASIC14.44□□□□□ -0.1
THBS1P07996 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 AC068587.6-202ENST00000641839 5619 ntBASIC14.43□□□□□ -0.1
THBS1P07996 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.43□□□□□ -0.1
THBS1P07996 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.43□□□□□ -0.1
THBS1P07996 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.43□□□□□ -0.1
THBS1P07996 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.43□□□□□ -0.1
THBS1P07996 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 AC092364.2-202ENST00000597012 1073 ntBASIC14.43□□□□□ -0.1
THBS1P07996 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.43□□□□□ -0.1
THBS1P07996 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
THBS1P07996 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.43□□□□□ -0.1
THBS1P07996 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS1P07996 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
THBS1P07996 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS1P07996 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS1P07996 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms