Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX6O95503 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.71■□□□□ 0.11
CBX6O95503 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.71■□□□□ 0.11
CBX6O95503 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.71■□□□□ 0.11
CBX6O95503 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.11
CBX6O95503 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.71■□□□□ 0.11
CBX6O95503 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.71■□□□□ 0.11
CBX6O95503 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.71■□□□□ 0.11
CBX6O95503 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CBX6O95503 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CBX6O95503 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.71■□□□□ 0.11
CBX6O95503 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CBX6O95503 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.71■□□□□ 0.1
CBX6O95503 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.71■□□□□ 0.1
CBX6O95503 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CBX6O95503 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
CBX6O95503 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
CBX6O95503 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CBX6O95503 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
CBX6O95503 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CBX6O95503 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CBX6O95503 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 AC011477.6-201ENST00000604980 1927 ntBASIC15.7■□□□□ 0.1
CBX6O95503 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 AC025580.3-201ENST00000617932 1424 ntBASIC15.7■□□□□ 0.1
CBX6O95503 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.7■□□□□ 0.1
CBX6O95503 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 AC087641.1-201ENST00000557561 1021 ntBASIC15.7■□□□□ 0.1
CBX6O95503 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.7■□□□□ 0.1
CBX6O95503 AC004835.2-201ENST00000603762 682 ntBASIC15.7■□□□□ 0.1
CBX6O95503 GGTLC5P-201ENST00000617623 998 ntBASIC15.7■□□□□ 0.1
CBX6O95503 AC093512.1-201ENST00000617969 520 ntBASIC15.7■□□□□ 0.1
CBX6O95503 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 AL353732.1-201ENST00000569618 1459 ntBASIC15.7■□□□□ 0.1
CBX6O95503 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.7■□□□□ 0.1
CBX6O95503 LINC01230-201ENST00000625222 3017 ntBASIC15.7■□□□□ 0.1
CBX6O95503 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CBX6O95503 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CBX6O95503 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX6O95503 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CBX6O95503 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX6O95503 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.69■□□□□ 0.1
CBX6O95503 PCDHA3-202ENST00000532566 4594 ntBASIC15.69■□□□□ 0.1
CBX6O95503 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CBX6O95503 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CBX6O95503 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX6O95503 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CBX6O95503 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
CBX6O95503 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CBX6O95503 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms