Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.17□□□□□ -0.3
SIX6O95475 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.17□□□□□ -0.3
SIX6O95475 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 AC011498.5-201ENST00000592027 486 ntBASIC13.17□□□□□ -0.3
SIX6O95475 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 AL139424.1-201ENST00000607572 797 ntBASIC13.17□□□□□ -0.3
SIX6O95475 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 TCAF1P1-201ENST00000414990 2232 ntBASIC13.17□□□□□ -0.3
SIX6O95475 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.17□□□□□ -0.3
SIX6O95475 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SIX6O95475 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SIX6O95475 AP001282.1-201ENST00000531301 1499 ntBASIC13.16□□□□□ -0.3
SIX6O95475 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 AP001267.2-201ENST00000532619 2086 ntBASIC13.16□□□□□ -0.3
SIX6O95475 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SIX6O95475 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.16□□□□□ -0.3
SIX6O95475 FAM8A3P-201ENST00000427218 844 ntBASIC13.16□□□□□ -0.3
SIX6O95475 ABCD1P5-201ENST00000445663 754 ntBASIC13.16□□□□□ -0.3
SIX6O95475 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.16□□□□□ -0.3
SIX6O95475 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.16□□□□□ -0.3
SIX6O95475 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SIX6O95475 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SIX6O95475 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SIX6O95475 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.16□□□□□ -0.3
SIX6O95475 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.16□□□□□ -0.3
SIX6O95475 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.16□□□□□ -0.3
SIX6O95475 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SIX6O95475 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SIX6O95475 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms