Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.84■□□□□ 0.29
CSPG5O95196 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG5O95196 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CSPG5O95196 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CSPG5O95196 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CSPG5O95196 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
CSPG5O95196 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CSPG5O95196 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.83■□□□□ 0.28
CSPG5O95196 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG5O95196 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.83■□□□□ 0.28
CSPG5O95196 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG5O95196 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG5O95196 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG5O95196 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG5O95196 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.83■□□□□ 0.28
CSPG5O95196 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 KRT90P-201ENST00000549264 1064 ntBASIC16.83■□□□□ 0.28
CSPG5O95196 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSPG5O95196 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.83■□□□□ 0.28
CSPG5O95196 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.83■□□□□ 0.28
CSPG5O95196 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CSPG5O95196 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CSPG5O95196 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CSPG5O95196 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CSPG5O95196 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.82■□□□□ 0.28
CSPG5O95196 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.82■□□□□ 0.28
CSPG5O95196 ALOX12P2-203ENST00000570921 1945 ntBASIC16.82■□□□□ 0.28
CSPG5O95196 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
CSPG5O95196 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CSPG5O95196 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 IGHJ2P-201ENST00000454480 60 ntBASIC16.82■□□□□ 0.28
CSPG5O95196 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.82■□□□□ 0.28
CSPG5O95196 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.82■□□□□ 0.28
CSPG5O95196 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.82■□□□□ 0.28
CSPG5O95196 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.82■□□□□ 0.28
CSPG5O95196 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.82■□□□□ 0.28
CSPG5O95196 MIR4741-201ENST00000579822 90 ntBASIC16.82■□□□□ 0.28
CSPG5O95196 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.82■□□□□ 0.28
CSPG5O95196 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.82■□□□□ 0.28
CSPG5O95196 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CSPG5O95196 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CSPG5O95196 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CSPG5O95196 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 AL391005.1-201ENST00000623953 2435 ntBASIC16.81■□□□□ 0.28
CSPG5O95196 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.81■□□□□ 0.28
CSPG5O95196 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
CSPG5O95196 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.81■□□□□ 0.28
CSPG5O95196 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CSPG5O95196 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.81■□□□□ 0.28
CSPG5O95196 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CSPG5O95196 AC012441.1-201ENST00000446669 685 ntBASIC16.81■□□□□ 0.28
CSPG5O95196 RPL13AP25-201ENST00000484130 612 ntBASIC16.81■□□□□ 0.28
CSPG5O95196 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.81■□□□□ 0.28
CSPG5O95196 SLED1-202ENST00000512051 380 ntBASIC16.81■□□□□ 0.28
CSPG5O95196 AP001582.1-201ENST00000525856 295 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms