Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 AL008718.2-201ENST00000609206 1313 ntBASIC20.25■□□□□ 0.83
LTN1O94822 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 DPM3-202ENST00000368399 517 ntBASIC20.25■□□□□ 0.83
LTN1O94822 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LTN1O94822 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.25■□□□□ 0.83
LTN1O94822 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.25■□□□□ 0.83
LTN1O94822 AC138696.2-201ENST00000607376 223 ntBASIC20.25■□□□□ 0.83
LTN1O94822 AC090164.2-201ENST00000611487 516 ntBASIC20.25■□□□□ 0.83
LTN1O94822 AP000346.4-201ENST00000614827 381 ntBASIC20.25■□□□□ 0.83
LTN1O94822 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.25■□□□□ 0.83
LTN1O94822 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LTN1O94822 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LTN1O94822 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.25■□□□□ 0.83
LTN1O94822 TUBBP5-203ENST00000508529 1334 ntBASIC20.25■□□□□ 0.83
LTN1O94822 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTN1O94822 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.24■□□□□ 0.83
LTN1O94822 RN7SL720P-201ENST00000488178 304 ntBASIC20.24■□□□□ 0.83
LTN1O94822 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 AC134698.3-201ENST00000523880 214 ntBASIC20.24■□□□□ 0.83
LTN1O94822 CFL1-214ENST00000534769 758 ntTSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 RN7SL774P-201ENST00000577467 290 ntBASIC20.24■□□□□ 0.83
LTN1O94822 AC005324.6-201ENST00000587972 613 ntBASIC20.24■□□□□ 0.83
LTN1O94822 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.24■□□□□ 0.83
LTN1O94822 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 AC079336.7-201ENST00000623428 1078 ntBASIC20.24■□□□□ 0.83
LTN1O94822 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTN1O94822 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LTN1O94822 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LTN1O94822 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.23■□□□□ 0.83
LTN1O94822 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.23■□□□□ 0.83
LTN1O94822 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.23■□□□□ 0.83
LTN1O94822 SHC1P1-201ENST00000425230 1745 ntBASIC20.23■□□□□ 0.83
LTN1O94822 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.23■□□□□ 0.83
LTN1O94822 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC20.23■□□□□ 0.83
LTN1O94822 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LTN1O94822 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 FKBP4P6-201ENST00000457486 1332 ntBASIC20.23■□□□□ 0.83
LTN1O94822 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.23■□□□□ 0.83
LTN1O94822 AL596276.2-201ENST00000447525 331 ntBASIC20.23■□□□□ 0.83
LTN1O94822 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LTN1O94822 RN7SL769P-201ENST00000469386 295 ntBASIC20.23■□□□□ 0.83
LTN1O94822 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.23■□□□□ 0.83
LTN1O94822 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LTN1O94822 Z98259.2-201ENST00000641583 609 ntBASIC20.23■□□□□ 0.83
LTN1O94822 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LTN1O94822 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.23■□□□□ 0.83
LTN1O94822 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.22■□□□□ 0.83
LTN1O94822 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms