Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BEST1O76090 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BEST1O76090 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BEST1O76090 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
BEST1O76090 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.34■□□□□ 0.21
BEST1O76090 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 MSTO2P-201ENST00000314835 1709 ntBASIC16.34■□□□□ 0.21
BEST1O76090 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BEST1O76090 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
BEST1O76090 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 SOCS2P1-201ENST00000417727 557 ntBASIC16.34■□□□□ 0.21
BEST1O76090 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.34■□□□□ 0.21
BEST1O76090 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.34■□□□□ 0.21
BEST1O76090 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
BEST1O76090 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
BEST1O76090 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.34■□□□□ 0.21
BEST1O76090 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.34■□□□□ 0.21
BEST1O76090 AC005252.2-201ENST00000624630 1141 ntBASIC16.34■□□□□ 0.21
BEST1O76090 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
BEST1O76090 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BEST1O76090 CICP11-201ENST00000434745 2827 ntBASIC16.34■□□□□ 0.21
BEST1O76090 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.34■□□□□ 0.21
BEST1O76090 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.34■□□□□ 0.21
BEST1O76090 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BEST1O76090 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BEST1O76090 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.33■□□□□ 0.21
BEST1O76090 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
BEST1O76090 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
BEST1O76090 AC087481.3-201ENST00000602886 1894 ntBASIC16.33■□□□□ 0.21
BEST1O76090 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BEST1O76090 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.33■□□□□ 0.2
BEST1O76090 U91328.1-201ENST00000437528 223 ntBASIC16.33■□□□□ 0.2
BEST1O76090 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
BEST1O76090 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.33■□□□□ 0.2
BEST1O76090 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
BEST1O76090 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.33■□□□□ 0.2
BEST1O76090 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.33■□□□□ 0.2
BEST1O76090 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms