Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFPL1O75677 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.75■□□□□ 0.11
RFPL1O75677 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 AL512356.2-201ENST00000546955 174 ntBASIC15.75■□□□□ 0.11
RFPL1O75677 HNRNPUP1-201ENST00000554987 333 ntBASIC15.75■□□□□ 0.11
RFPL1O75677 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.75■□□□□ 0.11
RFPL1O75677 AL135744.1-201ENST00000565098 629 ntBASIC15.75■□□□□ 0.11
RFPL1O75677 AL390955.2-201ENST00000603032 514 ntBASIC15.75■□□□□ 0.11
RFPL1O75677 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFPL1O75677 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RFPL1O75677 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RFPL1O75677 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 ZBED1P1-201ENST00000502364 1930 ntBASIC15.74■□□□□ 0.11
RFPL1O75677 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RFPL1O75677 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.74■□□□□ 0.11
RFPL1O75677 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.74■□□□□ 0.11
RFPL1O75677 AP001059.3-201ENST00000619053 235 ntBASIC15.74■□□□□ 0.11
RFPL1O75677 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.74■□□□□ 0.11
RFPL1O75677 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFPL1O75677 AC005089.1-201ENST00000619486 2241 ntBASIC15.74■□□□□ 0.11
RFPL1O75677 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RFPL1O75677 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 TUBB3P1-201ENST00000405796 1332 ntBASIC15.73■□□□□ 0.11
RFPL1O75677 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RFPL1O75677 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RFPL1O75677 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RFPL1O75677 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms