Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC005052.1-201ENST00000625181 2492 ntBASIC15.56■□□□□ 0.08
PCDHGA12O60330 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGA12O60330 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGA12O60330 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 KRT8P37-201ENST00000451609 1420 ntBASIC15.55■□□□□ 0.08
PCDHGA12O60330 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 MIR1908-201ENST00000410394 80 ntBASIC15.55■□□□□ 0.08
PCDHGA12O60330 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 FAM86LP-201ENST00000478302 853 ntBASIC15.55■□□□□ 0.08
PCDHGA12O60330 RPL13AP25-201ENST00000484130 612 ntBASIC15.55■□□□□ 0.08
PCDHGA12O60330 RN7SL219P-201ENST00000582872 296 ntBASIC15.55■□□□□ 0.08
PCDHGA12O60330 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGA12O60330 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGA12O60330 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 AZGP1P1-201ENST00000411909 902 ntBASIC15.54■□□□□ 0.08
PCDHGA12O60330 AL355994.2-201ENST00000447882 704 ntBASIC15.54■□□□□ 0.08
PCDHGA12O60330 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 POU5F1P6-201ENST00000466990 990 ntBASIC15.54■□□□□ 0.08
PCDHGA12O60330 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA12O60330 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA12O60330 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms