Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 BTBD7P1-201ENST00000447253 1453 ntBASIC13.97□□□□□ -0.17
TRAF3IP2O43734 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 C18orf15-201ENST00000623680 2534 ntBASIC13.97□□□□□ -0.17
TRAF3IP2O43734 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 AC068418.2-201ENST00000577309 3703 ntBASIC13.97□□□□□ -0.17
TRAF3IP2O43734 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 TOMM22P5-201ENST00000416399 439 ntBASIC13.96□□□□□ -0.17
TRAF3IP2O43734 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AC093214.1-201ENST00000511688 1107 ntBASIC13.96□□□□□ -0.17
TRAF3IP2O43734 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AC008738.7-201ENST00000609744 511 ntBASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AC004461.2-201ENST00000629517 803 ntBASIC13.96□□□□□ -0.17
TRAF3IP2O43734 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAF3IP2O43734 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 AC022144.1-201ENST00000602255 1580 ntBASIC13.96□□□□□ -0.18
TRAF3IP2O43734 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRAF3IP2O43734 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAF3IP2O43734 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms