Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.86■□□□□ 0.13
AP3B1O00203 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
AP3B1O00203 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.85■□□□□ 0.13
AP3B1O00203 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.85■□□□□ 0.13
AP3B1O00203 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
AP3B1O00203 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
AP3B1O00203 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.85■□□□□ 0.13
AP3B1O00203 HLA-V-204ENST00000476601 1289 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.85■□□□□ 0.13
AP3B1O00203 AC092865.5-201ENST00000545435 363 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.85■□□□□ 0.13
AP3B1O00203 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.85■□□□□ 0.13
AP3B1O00203 AL033527.5-202ENST00000641632 1098 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 AC079781.4-201ENST00000641908 219 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
AP3B1O00203 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
AP3B1O00203 AC099063.4-201ENST00000641099 1602 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.85■□□□□ 0.13
AP3B1O00203 AC144831.1-201ENST00000573312 2656 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 WASH3P-207ENST00000560956 1394 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 FO538757.1-201ENST00000623083 1397 ntBASIC15.85■□□□□ 0.13
AP3B1O00203 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP3B1O00203 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.85■□□□□ 0.13
AP3B1O00203 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 AL133267.1-201ENST00000398220 340 ntBASIC15.84■□□□□ 0.13
AP3B1O00203 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.84■□□□□ 0.13
AP3B1O00203 HLA-J-203ENST00000494367 1087 ntBASIC15.84■□□□□ 0.13
AP3B1O00203 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.84■□□□□ 0.13
AP3B1O00203 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
AP3B1O00203 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP3B1O00203 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.84■□□□□ 0.13
AP3B1O00203 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.83■□□□□ 0.13
AP3B1O00203 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.83■□□□□ 0.13
AP3B1O00203 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
AP3B1O00203 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.83■□□□□ 0.13
AP3B1O00203 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
AP3B1O00203 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
AP3B1O00203 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
AP3B1O00203 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms