Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 AC079140.1-201ENST00000508039 487 ntBASIC16.31■□□□□ 0.2
SRRM3A6NNA2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 AC004233.3-201ENST00000607794 1269 ntBASIC16.31■□□□□ 0.2
SRRM3A6NNA2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM3A6NNA2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 AL359183.1-201ENST00000623796 2132 ntBASIC16.3■□□□□ 0.2
SRRM3A6NNA2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 MIR1909-201ENST00000411312 80 ntBASIC16.3■□□□□ 0.2
SRRM3A6NNA2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 AC069120.2-201ENST00000524091 540 ntBASIC16.3■□□□□ 0.2
SRRM3A6NNA2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.3■□□□□ 0.2
SRRM3A6NNA2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM3A6NNA2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 CICP14-201ENST00000629111 2732 ntBASIC16.29■□□□□ 0.2
SRRM3A6NNA2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AC092658.1-201ENST00000505836 891 ntBASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms