Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 AC105339.3-201ENST00000560043 636 ntBASIC16.79■□□□□ 0.28
CTAGE9A4FU28 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTAGE9A4FU28 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 AF186996.4-201ENST00000467186 377 ntBASIC16.78■□□□□ 0.28
CTAGE9A4FU28 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 AL121912.1-201ENST00000603683 238 ntBASIC16.78■□□□□ 0.28
CTAGE9A4FU28 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 LINC01230-201ENST00000625222 3017 ntBASIC16.78■□□□□ 0.28
CTAGE9A4FU28 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 BX640514.1-201ENST00000583223 1918 ntBASIC16.78■□□□□ 0.28
CTAGE9A4FU28 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 ST20-AS1-201ENST00000560255 4223 ntBASIC16.78■□□□□ 0.28
CTAGE9A4FU28 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTAGE9A4FU28 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTAGE9A4FU28 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms