Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CTBP2P5-201ENST00000454986 1264 ntBASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 AP001889.1-201ENST00000525414 633 ntBASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSNK1G3Q9Y6M4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 AL121723.1-201ENST00000445194 1519 ntBASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 AC011477.6-201ENST00000604980 1927 ntBASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSNK1G3Q9Y6M4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 ACKR1-201ENST00000368121 1240 ntBASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 FO681548.1-201ENST00000455617 1132 ntBASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC022494.1-201ENST00000466044 728 ntBASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC093813.1-201ENST00000605066 256 ntBASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 PAUPAR-201ENST00000630360 2965 ntBASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CSNK1G3Q9Y6M4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms