Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 AZGP1P1-201ENST00000411909 902 ntBASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 AC136604.1-201ENST00000418535 575 ntBASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 HNRNPUP1-201ENST00000554987 333 ntBASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 AC097359.3-201ENST00000603982 1210 ntBASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 Z99916.3-201ENST00000623422 1080 ntBASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA11Q9Y5H2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHGA11Q9Y5H2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms