Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AC105233.2-201ENST00000523697 349 ntBASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AF228730.5-201ENST00000530288 346 ntBASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 MIR7706-201ENST00000613747 67 ntBASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
UBE2D4Q9Y2X8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AC025580.3-201ENST00000617932 1424 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 WASH3P-207ENST00000560956 1394 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 FO538757.1-201ENST00000623083 1397 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 BCAR1-209ENST00000546196 1340 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 FAM8A3P-201ENST00000427218 844 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 PHKG1P2-201ENST00000457537 863 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 EMBP1-201ENST00000458200 901 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 UNC93B7-201ENST00000509439 705 ntBASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
UBE2D4Q9Y2X8 AL136982.4-201ENST00000437689 1740 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms