Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 AL136982.4-201ENST00000437689 1740 ntBASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 KRT18P28-201ENST00000453838 1332 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 CYP4F24P-201ENST00000586049 1580 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 NORAD-201ENST00000565493 5339 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 SPDYE17-201ENST00000412399 783 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 AC067863.1-201ENST00000494933 530 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 BANF1P1-201ENST00000553684 263 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 CICP14-201ENST00000629111 2732 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 AC087481.3-201ENST00000602886 1894 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 BNIP3P1-202ENST00000550043 1585 ntBASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAPPC4Q9Y296 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 EEF1DP4-201ENST00000446006 880 ntBASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AL133215.2-201ENST00000609242 977 ntBASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAPPC4Q9Y296 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms