Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXD3Q9UJU5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 KRT43P-201ENST00000434019 910 ntBASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TARDBPP1-201ENST00000442013 1203 ntBASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 CTBP2P3-201ENST00000585629 1255 ntBASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FOXD3Q9UJU5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 CLK3P2-201ENST00000427566 1453 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AC079776.1-201ENST00000401540 1152 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AC112492.5-201ENST00000421897 457 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 AL442647.2-201ENST00000429864 857 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 RPS2P32-201ENST00000439199 892 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AC092552.1-201ENST00000547243 906 ntBASIC14□□□□□ -0.17
FOXD3Q9UJU5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14□□□□□ -0.17
FOXD3Q9UJU5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14□□□□□ -0.17
FOXD3Q9UJU5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms