Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 PFN1P12-201ENST00000455938 534 ntBASIC15.7■□□□□ 0.1
MBD1Q9UIS9 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.7■□□□□ 0.1
MBD1Q9UIS9 GNRHR2-203ENST00000581100 1187 ntBASIC15.7■□□□□ 0.1
MBD1Q9UIS9 MIR3615-201ENST00000581999 87 ntBASIC15.7■□□□□ 0.1
MBD1Q9UIS9 AL450472.2-201ENST00000603663 1156 ntBASIC15.7■□□□□ 0.1
MBD1Q9UIS9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 HYMAI-201ENST00000635591 3347 ntBASIC15.7■□□□□ 0.1
MBD1Q9UIS9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD1Q9UIS9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AC004945.1-201ENST00000416738 983 ntBASIC15.69■□□□□ 0.1
MBD1Q9UIS9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AC079316.1-201ENST00000548397 411 ntBASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AC000095.1-201ENST00000603208 874 ntBASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 RHOXF1P1-202ENST00000635473 501 ntBASIC15.69■□□□□ 0.1
MBD1Q9UIS9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AL607033.1-201ENST00000623900 1599 ntBASIC15.69■□□□□ 0.1
MBD1Q9UIS9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AC009090.5-201ENST00000624886 2285 ntBASIC15.69■□□□□ 0.1
MBD1Q9UIS9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD1Q9UIS9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.68■□□□□ 0.1
MBD1Q9UIS9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD1Q9UIS9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MBD1Q9UIS9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD1Q9UIS9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MBD1Q9UIS9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MBD1Q9UIS9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms