Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 AC092384.3-202ENST00000564646 2873 ntBASIC14.44□□□□□ -0.1
UBQLN4Q9NRR5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 TOMM22P5-201ENST00000416399 439 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AC114501.2-201ENST00000439631 535 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AC004890.2-204ENST00000481968 304 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AC093214.1-201ENST00000511688 1107 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 RNA5SP421-201ENST00000516864 134 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AL390955.2-201ENST00000603032 514 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 LINC01115-203ENST00000606068 577 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AF228730.6-201ENST00000641497 218 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AC084121.3-201ENST00000641716 218 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AC022144.1-201ENST00000602255 1580 ntBASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBQLN4Q9NRR5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AC073347.1-201ENST00000421633 2643 ntBASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AL133267.1-201ENST00000398220 340 ntBASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 RPL5P21-201ENST00000404620 815 ntBASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AC009407.1-201ENST00000568958 598 ntBASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AC005498.2-205ENST00000593218 784 ntBASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 HYMAI-201ENST00000635591 3347 ntBASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 AC126177.1-201ENST00000547829 2218 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms