Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SCAF1Q9H7N4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCAF1Q9H7N4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCAF1Q9H7N4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 MTCYBP11-201ENST00000447254 1109 ntBASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 RHOQP1-201ENST00000555758 579 ntBASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 WASH6P-202ENST00000359512 1437 ntBASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 AC007191.1-201ENST00000623179 2995 ntBASIC23.65■■□□□ 1.38
SCAF1Q9H7N4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 SPDYE19P-201ENST00000338590 713 ntBASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 BTG3P1-201ENST00000435859 716 ntBASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 CROCCP4-201ENST00000457096 498 ntBASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 AC018635.1-201ENST00000468292 1030 ntBASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 AC104989.1-201ENST00000519711 778 ntBASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCAF1Q9H7N4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCAF1Q9H7N4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SCAF1Q9H7N4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCAF1Q9H7N4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 MIR346-201ENST00000362234 95 ntBASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 AC007967.4-201ENST00000614700 386 ntBASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 AC083899.2-201ENST00000423285 1376 ntBASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCAF1Q9H7N4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC107918.2-201ENST00000530817 355 ntBASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SCAF1Q9H7N4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms