Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2OQ9C0C9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TOMM22P5-201ENST00000416399 439 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TARDBPP1-201ENST00000442013 1203 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AC126915.1-201ENST00000522847 1038 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AC134698.3-201ENST00000523880 214 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 MIR3907-201ENST00000579424 151 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 MIR4321-201ENST00000592276 80 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
UBE2OQ9C0C9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 POM121L10P-201ENST00000436994 1285 ntBASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 FGFR3P5-201ENST00000564496 886 ntBASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 GGT4P-201ENST00000623672 1708 ntBASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.23■□□□□ 0.35
UBE2OQ9C0C9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms