Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 AC023024.2-201ENST00000623561 1993 ntBASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 MIR6080-201ENST00000617359 66 ntBASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 AC106881.1-201ENST00000605849 3329 ntBASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF3BQ9BZI7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 SPDYE17-201ENST00000412399 783 ntBASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 SPCS2P1-201ENST00000561636 679 ntBASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 AC027612.4-201ENST00000605371 583 ntBASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF3BQ9BZI7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 LINC00528-201ENST00000600723 2160 ntBASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AGAP7P-201ENST00000582299 2062 ntBASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 AGAP14-201ENST00000624701 2060 ntBASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPF3BQ9BZI7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.71■□□□□ 0.59
UPF3BQ9BZI7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms